Index

A

analysis_tools (module)

B

build_dydt_list() (in module ligpy_utils) build_k_matrix() (in module ligpy_utils)

build_rates_list() (in module ligpy_utils) build_reactant_dict() (in module ligpy_utils) build_species_rxns_dict() (in module ligpy_utils)

C

C_fun_gen() (in module analysis_tools) check_mass_balance() (in module ligpy_utils)

check_species_fate() (in module ligpy_utils) check_species_in_MW() (in module ligpy_utils) constants (module)

D

ddasac_utils (module)

define_initial_composition() (in module ligpy_utils)

E

equivalent_compositions (module)

G

generate_report() (in module analysis_tools) get_equiv_comp() (in module equivalent_compositions) get_k_value() (in module ligpy_utils)

get_k_value_list() (in module ligpy_utils) get_species_list() (in module equivalent_compositions) get_speciesindices() (in module ligpy_utils) get_specieslist() (in module ligpy_utils)

L

ligpy_utils (module)

load_results() (in module analysis_tools) lump_species() (in module analysis_tools)

R

read_results_files() (in module analysis_tools)

run_ddasac() (in module ddasac_utils)

S

set_paths() (in module ligpy_utils)

T

tar_elem_analysis() (in module analysis_tools)

W

write_compositionlist() (in module equivalent_compositions) write_ddasac_format_rxns() (in module ddasac_utils)

write_ddat() (in module ddasac_utils) write_rates_and_odes() (in module ligpy_utils)